Started a re-write of the docs (#1967)

* Started a re-write of the docs, using CSV for tables and re-organizing parameter definitions

* Added final config options in --config, some have external references which needs to be populated

* Forgot to escape a comma

* Clarified a note

* Added disk configuration and disk encryption docs

* Changed way of installing using source and python

* Added a 'list script' that lists available scripts. This could be converted to a argparse later. But this does the trick for now. And it's added to ease documentation and listing of available options.

* Added a 'Known issues' section, as well as renamed the issues tab

* Finished up the known issues section

* Added a section regarding --plugin

* Added plugin description, tweaked disk_config to the latest changes from #2221

* Added custom-commands docs, and improved some creds and known issue links

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